Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015910505.1_cds_XP_016460551.1_53962
CDS Infomation

[gene=LOC107784015] [db_xref=GeneID:107784015] [protein=abscisic-aldehyde oxidase-like] [frame=3] [partial=5'] [exception=annotated by transcript or proteomic data] [protein_id=XP_016460551.1] [location=complement(join(58541..58785,60113..60302,60408..60506,60912..61007,61786..62751,63348..63566,63915..64124,64256..>64515))] [gbkey=CDS]
Sequence

GAATCTGTTTACGTGGACGACATTCCATCACCACCAAACTGCCTATATGGAGCATTTATC
TATAGTACAAGACCATTAGCAGGGGTAAAGGGCATCCATTTTGGGACTAATTCATTACCT
GATGGAGTTAGTTGCATTATTACTTTTAAAGATATCCCGAGCAGAGGAGCAAATGTAGGA
TCTAAGACCATATTTGGTCCCGAACCTTTATTTGCAGATGATCTCACCCGATATGCTGGT
GACCGAATTGCTTTTGTGGTTGCTGAAAGTCAGAGGTCTGCTGATGTGGCCGCAAACATG
GCCGTCGTTGAATATGACACTGAAAATGTAGATTCACCAATTTTAACTGTCGAGGAAGCA
GTTCAGAAGTCCAGTTTTTTTCAAGTTCCACCATTTCTATATCCGAAAAAAGTTGGTGAT
TTCTCAAAAGGAATGGCTGAAGCTGACCACAAGATCCTCTCTGCTGAGATGAGACTTGGG
TCTCAGTACTACTTTTATATGGAGACACAGACTGCTCTTGCAGTTCCGGATGAAGATAAC
TGTATGGTTGTCTACGCATCAAGTCAGTGCCCCGAGTATGTAGGTAGTGTAATTGCTAGT
TGTCTTGGTGTCCCCGAGCACAACATCCGTGTTGTTACAAGAAGGGTTGGAGGTGGCTTT
GGAGGCAAGGCGGTGAGAGCGATGCCTGTCTCCACAGCCTGTGCACTTGCAGCGTTCAAG
TTACAACGCCCTGTCCGAATATGCGTCAACCGAAAGACTGACATGATTATGGCAGGAGGG
AGACACCCCATGAAAATAACATACAGTGTTGGATTTAAGTCAAATGGGAAAATCACTGCC
TTACATCTTGATGTATTGATAAATGCTGGGCTAATTGAAGATGTAAGCCCTATCATACCG
TCGAACTTTATCGGGGCTCTCAAAAAGTATGATTGGGGTGCCTTATCTTTTGATATAAAT
GTATGTAAGACGAACCTTACTAGCAAATCAGCTATGCGGGGCCCGGGGGAGGTACAAGGA
TCGTATATTGCCGAAGCTATAATGGAGCATGTAGCGAGTGTACTGTCTTCGGAGGTGGAC
TCAATCAGAAAACAAAATATTCATACATTTGAAAGTCTTAAATTATTTTATGAGCACAGT
GCAGGAGATATAGGAGATTATACTTTACCAGGTATGATGGATAAGCTGGCCACATCATCA
AGTTTCGTTCAAAGAAGTGAGATGATAGGACAATATAACCAGAAAAATATATGGAAGAAA
AGGGGTATTTCTCGAGTGCCACTTGTTTATGAATCTACACAACGACCAACGCCCGGAAAA
GTAAGCATTCTGTCGGACGGATCAATAGTTGTTGAGGTCGGAGGTATTGAAATAGGCCAA
GGTCTATGGACAAAGGTGAAGCAAATGACAGCCTATGGTCTTAGTTTAATTGAAAGTAGT
TGGGGTGAAGAACTTGTGGAGAAAGTACGCGTCATACAAGCAGACACTTTAAGCTTAGTG
CAAGGCGGGTTTACTGCTGGAAGTACTACATCTGAATCGAGCTGTGAAGCTGTTAGACTT
TGCTGTAATGTATTAGTTGAAAGACTGACCCCTCTGAAGAAGACATTGCAAGAACAAAAT
GGTTCTGTTGATTGGACTACATTGATTCGCCAGGCACAAATGCAAGCAATTAACTTAGCA
GCGAACTCTTATTATGTGCCGGCATTCGGTTCCATGCAATATTTGAACTATGGTGCTGCT
GTAAGCGAGGTAGAGATAGATATCCTGACAGGAGAAACAAAAATTTTGCAGTCAGACATT
ATATATGACTGTGGACAAAGCTTGAACCCAGCTGTTGATATGGGACAGATTGAAGGGGCT
TTTGTTCAAGGAATTGGATTTTTTATGCTCGAAGAGTATCTTACAAACACAGACGGGTTG
GTCGTTTCGGATAGTACTTGGACATACAAGATCCCAACAATTGACACAATACCGAAAAAT
TTCAATGTTCGAGTGCTAAACAGTGGACATCACGAGAAACGTGTTCTCTCGTCTAAAGCA
TCTGGTGAACCGCCACTACTTCTGGCATCCTCGGTTCATTGTGCAACAAGAGCAGCCATT
AAAGCAGCAAGAAAACAACTTAAACTTTGGGTCAAGCTCGACGAGTCTGATTCGGAATTC
TATTTGAATGTTCCTGCCACATTACCTGTTGTGAAGACACAATGTGGCCTAGATTATGTG
GAGAAATACTTGGAAAGTCTGCTTCATTACAAAATCGAAACCACCTCTCTACCTTCTAGG
TAG

Peptide Sequence

PEP ID

XP_016460551.1
PEP Infomation

PREDICTED: abscisic-aldehyde oxidase-like [Nicotiana tabacum]
Sequence

MKKSGASLQASGESVYVDDIPSPPNCLYGAFIYSTRPLAGVKGIHFGTNSLPDGVSCIIT
FKDIPSRGANVGSKTIFGPEPLFADDLTRYAGDRIAFVVAESQRSADVAANMAVVEYDTE
NVDSPILTVEEAVQKSSFFQVPPFLYPKKVGDFSKGMAEADHKILSAEMRLGSQYYFYME
TQTALAVPDEDNCMVVYASSQCPEYVGSVIASCLGVPEHNIRVVTRRVGGGFGGKAVRAM
PVSTACALAAFKLQRPVRICVNRKTDMIMAGGRHPMKITYSVGFKSNGKITALHLDVLIN
AGLIEDVSPIIPSNFIGALKKYDWGALSFDINVCKTNLTSKSAMRGPGEVQGSYIAEAIM
EHVASVLSSEVDSIRKQNIHTFESLKLFYEHSAGDIGDYTLPGMMDKLATSSSFVQRSEM
IGQYNQKNIWKKRGISRVPLVYESTQRPTPGKVSILSDGSIVVEVGGIEIGQGLWTKVKQ
MTAYGLSLIESSWGEELVEKVRVIQADTLSLVQGGFTAGSTTSESSCEAVRLCCNVLVER
LTPLKKTLQEQNGSVDWTTLIRQAQMQAINLAANSYYVPAFGSMQYLNYGAAVSEVEIDI
LTGETKILQSDIIYDCGQSLNPAVDMGQIEGAFVQGIGFFMLEEYLTNTDGLVVSDSTWT
YKIPTIDTIPKNFNVRVLNSGHHEKRVLSSKASGEPPLLLASSVHCATRAAIKAARKQLK
LWVKLDESDSEFYLNVPATLPVVKTQCGLDYVEKYLESLLHYKIETTSLPSR

Transcript Sequence

Gene sequence data has not been registered.